Ways to Fight Cancer

Ways to Fight Cancer. 1. Read the course textbook’s chapter on cell division, specifically the last section on how cells become cancerous. This is context for completing Individual Assignment 3.

2. Watch the Presentation in Module/Week 9 entitled “Ways to Fight Cancer.” Notice that the presentation outlines essentially 3 approaches to fighting cancer: a) reduction of cancer risks, b) correction of cancer genes, and c) destruction of cancerous tissue.

3. Open the “10 Discoveries in the War on Cancer”Âť document in the Assignment Instructions folder. Scan the discoveries briefly. Then, open the assignment submission link in Module/Week 9. In the text box, number from 1 to 10 for the 10 discoveries.

4. Reflect carefully on discovery 1. Would this discovery be more useful for a) reducing cancer risks, b) correcting/restoring cancer cells to normal, or c) destroying cancerous tissue? After number 1 in your list, place in parentheses the letter representing the approach to fighting cancer that will best be served by this new discovery. (More than 1 approach may be served, but which is most likely to be helped most significantly?)

5. Repeat this analysis for each of the remaining 9 discoveries. Return to the “Ways to Fight Cancer”Âť presentation as needed for additional perspective. When finished, your entire text box must be simple: a numbered (1-10) list of letters (a), (b) or (c). The assignment is now complete.

6. Each correct association up to 8 correct answers is granted 7 points. If you get 9 or 10 out of 10, you get a perfect score (60 pts.) on the assignment.

Submit this assignment by 11:59 p.m. (ET) on Monday of Module/Week 9.

BIOL 101

Individual Assignment 3 – 10 Discoveries in the War on Cancer

1. Virologists are modifying lentiviruses as vectors for carrying proto-oncogenes into cancer-transformed cells in culture. They are developing this virus for inserting the ras proto-oncogene directly into its correct location in the genome. The correct ras gene will already be linked to human DNA on either side of it and complexed with a recombination enzyme that will insert it into its correct location within the human genome. At the same time, the recombination enzyme will excise the defective oncogenic form of ras. The cells in culture should again come under normal hormonal control and require extra-cellular signals in order to continue dividing.

 

2. Malignant brain tumors in adults are fast-growing cancers with median survival rates of 15 months, even with aggressive treatment. Researchers have been searching for genetic “signatures” (characteristic groups of cancer-causing genes) that could help in defining the kind of brain tumor the patient has. They hope to be better able to predict the course of the disease and more accurately design the patient’s course of treatment.

 

3. Tobacco smoking is the leading cause of preventable deaths worldwide. It is a risk factor for lung cancer and several other types of cancer. Results of analysis of the entire human gene collection (the “genome”) support some previous findings that a region of human chromosome number 15 contains one or more genes that are associated with smoking intensity (the number of cigarettes smoked per day) and the closely related trait of nicotine dependency. Scanning people’s genomes for these genes will help them to determine their risk of addiction should they begin smoking tobacco.

 

4. Immunologists are working with a mutation (HER2) that is expressed on the surface of many breast, bladder, pancreatic, and ovarian cancer cells. They have made antibodies against this mutant surface protein. These antibodies have been covalently bonded to a “gene expression vector” that makes cells light up when incubated with luciferin from fire flies. The vector takes the gene for luciferin into the cancer cells. The researchers have shown that their antibody can accurately find and “light up” cancer cells. Their next step is to bond the antibody to an expression vector that carries the normal HER2 gene into mutant cancer cells.

 

5. Immunologists are investigating ways to destroy lymphocytes (white blood cells of the immune system) that have become cancerous (lymphomas). A current drug Rituximab contains antibodies that bind to the surfaces of these lymphocytes setting them up for destruction by the cancer patient’s own immune system. They are currently seeking ways to modify the antibody’s structure so that it will attract the cancer patient’s “natural killer” (NK) cells to the lymphocytes. Success of this project will bring a multi-faceted immune response against lymphomas and hasten destruction.

 

6. Biochemists have discovered a protein kinase enzyme named BRAF that is an important link in a molecular pathway that causes a cell to divide. Normally, BRAF responds to signals coming from outside the cell—signals calling for the cell to divide normally under normal conditions. But there is a mutation in BRAF enzymes that causes it activate the cell toward division continually. In this way it gives rise to melanomas and thyroid or ovarian cancers. Biochemists have also found a drug, vemurafenib, which binds selectively to mutant BRAF totally inactivating it. Cells that have inactivated BRAF undergo apoptosis—a process that leads to cell death.

 

7. Molecular biologists have taken nanoparticle-sized spheres and used them to deliver a cell-killing toxin from bee venom to tumors in mice, substantially reducing tumor growth without harming normal body tissues. Nanoparticles are known to concentrate in solid tumors because blood vessels in tumors show “enhanced permeability and retention effect” or EPR. Hence substances such as nanoparticles escape more readily from the bloodstream into tumors and the generally poor drainage of lymph from tumors further helps trap the particles in tumor tissue.

 

8. Organic chemists are exploring structural variations of the organic compound avobenzone (1-[4-Methoxyphenyl]-3-[4-tert-butylphenyl] propane-1,3-dione) for inclusion in sunblock products. Avobenzone is known for its ability to absorb a broad spectrum of ultra-violet radiations including UVB light (known to enhance the frequency of basal cell and squamous cell carcinomas [skin cancers]); and UVA rays thought to increase the frequency of melanoma cancers. New variations in the structure of avobenzone are hoped to retain the ability to absorb harmful UV radiation while having an increased stability in the presence of that radiation.

 

9. Biochemists are analyzing the many, many components of red meat (beef and pork) to determine which component, if any, will cause increased colorectal cancer rates in mice when the component is administered orally. Studies have shown that higher colorectal cancer rates in humans are associated with higher consumption rates of red meat.

 

10. Molecular biologists have developed a new sequence of human genes called an ankyrin insulator sequence. A new corrected or therapeutic gene is placed within this sequence. Its role is to create an active area on a human chromosome where the new gene can work efficiently no matter what chromosome it lands on.

Page 1 of 2

Ways to Fight Cancer

 
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Pandemic Pandemonium

Pandemic Pandemonium.

Case copyright held by the National Center for Case Study Teaching in Science, University at Buffalo, State University of New York. Origi- nally published March 31, 2020. Please see our usage guidelines, which outline our policy concerning permissible reproduction of this work. Image credit: Morphology exhibited by coronaviruses, CDC/Alissa Eckert and Dan Higgins, <https://phil.cdc.gov/Details.aspx?pid=23311>.

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Part I – The Need to Quarantine “But I want to go out with my friends! This is so unfair!” Kat wailed from across the room while her mom and dad sat stone-faced on the couch. The sixteen-year-old high school student thought this sounded like torture.

“We’re sorry, sweetheart, but one of your mother’s employees has tested positive for COVID-19. Since they share an office, we have to stay here for 14 days to make sure we’re all okay,” Dad stated in a matter-of-fact voice.

“But that’s silly! We only spent one hour in mom’s office yesterday before soccer practice. We weren’t even there that long!” Megan, Kat’s twin sister, scoffed.

“Well, that’s all it takes,” Mom retorted. “We are going to listen to the recommendations of the doctors and that’s final. We are quarantining ourselves here for two weeks.”

Megan and Kat left the room and headed to their shared bedroom. Megan, the daughter who always needed evidence to back up any statement, immediately took out her laptop and started searching for answers. Kat watched over her shoulder.

Megan wanted to know all about this disease. She had never heard of COVID-19, much less thought about getting it. Megan found information on the CDC website about the disease COVID-19 and about the virus that causes it, SARS-CoV-2. Based on the statistics she was seeing, she couldn’t figure out why her mom was so worried. It looked as though this was a disease to be worried about if you were elderly, but she and her sister were sixteen, so she figured that they should be just fine.

(Use the following sources that Megan consulted to help you answer the questions below.) • Centers for Disease Control and Prevention. Coronavirus (COVID-19).

<https://www.cdc.gov/coronavirus/2019-nCoV/index.html> • World Health Organization. Q&A on coronaviruses (COVID-19).

<https://www.who.int/news-room/q-a-detail/q-a-coronaviruses>

Questions 1. What are the symptoms of COVID-19?

2. What are the mechanisms of transmission of SARS-CoV-2?

3. What is a quarantine? How long does a quarantine usually last? On what factors does the length of a quarantine depend? Why are Megan and Kat’s family in a 14-day quarantine?

4. Based on the information above, do you think Megan and Kat are at risk of developing COVID-19? Why or why not?

Pandemic Pandemonium: Why Can’t We Just Treat COVID-19? by Melissa S. Kosinski-Collins, Lindsay Mehrmanesh, Jessie Cuomo, and Kene N. Piasta Department of Biology Brandeis University, Waltham, MA

 

 

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Page 2“Pandemic Pandemonium” by Kosinski-Collins, Mehrmanesh, Cuomo, & Piasta

Part II – Exploring the Structure of SARS-CoV-2 Kat noticed that one of the recommendations from the CDC for prevention of COVID-19 was to “wash her hands with soap,” and she giggled outwardly. That was obvious! She had been washing her hands since she was a toddler before meals. She pulled out her own laptop and started looking for “real scientific” answers rather than what she thought was the somewhat obvious information Megan was finding.

Kat started researching SARS-CoV-2 and its structure. When looking at pictures of the coronavirus, Kat wasn’t surprised to learn that the name meant “crown” virus. That made sense given that most of the pictures she saw looked like the virus had a halo or crown surrounding it. But what was the crown made of?

She quickly learned that SARS-CoV-2 belonged to a bigger family of viruses called the SARS-associated coronaviruses. She found out that like most viruses, it had a core containing nucleic acid and several associated proteins. She went on to read that unlike the other typical viruses she had learned about in school, the SARS-associated coronavirus has characteristics that make it slightly different. She discovered the following characteristics of the SARS-associated coronavirus virion, or virus particle:

• It is an RNA virus, meaning it has a nucleic acid center made of RNA and not DNA.

• It has a protein associated with the RNA called nucleocapsid protein.

• It has an outer phospholipid bilayer surrounding the structure that has several different types of glycoproteins embedded within it.

• The glycoproteins found in the cell membrane are spike, envelope and membrane glycoprotein.

• There are other accessory proteins used by the virus that help with infection and replication in host cells.

Kat found an illustration (Figure 1). “It has a phospho- lipid membrane,” she gasped, “That’s why I need to use soap and wash my hands to clean off this virus!” She thought about this for a moment and realized learning about lipids in her high school chemistry class was finally coming in handy. This was just the thing to destroy the outside of a coronavirus! Maybe Megan’s research hadn’t been so silly after all.

Questions Answer the following questions. If you use an outside source, be sure to include a citation.

1. What are the structural and functional differences between DNA and RNA?

2. List one human-infecting virus that has a DNA-based genome.

3. What is a glycoprotein? Where are they found in human cells? List some of their functions.

4. Hypothesize as to why coronaviruses may have glycoproteins in their membranes. What may be the purpose and function of these structures?

5. Describe the structure of a phospholipid and a phospholipid bilayer. Indicate the polar and nonpolar parts of the structure for each.

6. Describe how soap could chemically destroy a coronavirus virion.

Figure 1. Schematic drawing of SARS-CoV-2.

 

 

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Page 3“Pandemic Pandemonium” by Kosinski-Collins, Mehrmanesh, Cuomo, & Piasta

Part III – How Does SARS-CoV-2 Infect Me? Kat decided to find out more about the mechanism of infection of SARS-CoV-2 as compared to other viruses she had heard of like HIV and herpes. She knew many viruses have a lytic cycle. In the lytic cycle, viruses actively replicate themselves inside the host utilizing the host machinery, and eventually destroy the host cell.

Coronaviruses, she found, are viruses that seemed to be something unlike the typical viruses she had studied. She considered the steps of coronavirus infection below:

Step 1: SARS-CoV-2 is recognized by and attaches to the host cell via the spike glycoproteins in the cell membrane of the virus.

Step 2: SARS-CoV-2 is engulfed by the host cell.

Step 3: The original infecting SARS-CoV-2 RNA is released, but remains in the host cytoplasm.

Step 4: A specific section of the original infecting SARS-CoV-2 RNA is translated to make RNA-dependent RNA polymerase.

Step 5: The viral RNA-dependent RNA polymerase simultaneously makes complete copies of the genomic RNA to be packaged into new virions and transcribes specific sections to mRNA as templates for translation from the original infecting RNA.

Step 6: The newly synthesized coronavirus viral mRNA is translated into viral proteins like viral proteases, structural proteins, and RNA-dependent RNA polymerase using host ribosomes.

Step 7: Many of the newly synthesized viral proteins are processed for packaging into new virions.

Step 8: Partially complete virions are assembled and then bud from the host taking with them host membrane.

Questions 1. Describe the steps of lytic infection typical to a DNA virus like herpes simplex virus.

2. How are the steps of SARS-CoV-2 infection different from lytic infection of a DNA virus? How are they similar?

3. How might an RNA-based genome result in an increased infection rate? What are some potential complications to this infection strategy?

4. What is the central dogma of biology? How does coronavirus defy traditional models of central dogma?

5. Fill in the table below comparing four different viruses. Use resources found at either/both of the following websites to guide you in the process: • Centers for Disease Control and Prevention. <https://www.cdc.gov> • National Center for Biotechnology Information. <https://www.ncbi.nlm.nih.gov>

 

 

 

NATIONAL CENTER FOR CASE STUDY TEACHING IN SCIENCE

Page 4“Pandemic Pandemonium” by Kosinski-Collins, Mehrmanesh, Cuomo, & Piasta

Table 1. Comparison of four different viruses.

Name of Virus SARS-CoV-2 Herpes Simplex Virus (Type-1)

HIV Influenza B

Symptoms

Incubation period (time of acquisition to onset)

Type of cell the virus infects

Nucleic acid type

Accessory proteins

Does the virion have a membrane? (Yes/No)

Does virus integrate into the host genome? (Yes/No)

Treatment

 

 

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Page 5“Pandemic Pandemonium” by Kosinski-Collins, Mehrmanesh, Cuomo, & Piasta

Part IV – The Unfortunate Diagnosis After almost a week of being home under quarantine, the girls started to get restless. They went out to play soccer in the backyard, quickly passing the ball back and forth in a warm-up drill. Kat began to make mistakes that she usually didn’t make and just seemed “out of it” to Megan.

“One week off from practice and you can’t even play anymore?” Megan quipped with a huge grin on her face. “I guess, I’m now the better player.”

“No. I don’t feel very good, “ Kat said looking at the ground. “I’m just so tired and it’s like I can’t get enough air. I’m going inside.”

That afternoon, Kat began running a fever. Her symptoms became increasingly worse to the point where her parents simply couldn’t keep her fever in check. The girls’ parents took Kat to the emergency room the next day to find out that she was positive for COVID-19. While in the hospital and receiving expert medical care, Kat’s breathing became more and more labored. The doctors even began discussing the possible need of a ventilator to help her breathe.

Pleading with the doctors for some kind of help, Kat’s parents became desperate.

“Isn’t there something you can do to help treat this virus in her? Can’t you give her penicillin? Give her that!” Kat’s dad began yelling frantically.

“I’m sorry, but that just won’t work against this virus. Antibiotics, like penicillin, only work on bacteria. Antivirals are the pharmacological agents that we usually use to treat viral infections. I’m afraid that we don’t have any available to use against COVID-19. There is nothing we can do right now other than help her rest and keep her comfortable. She will likely be okay if we give her time to recover.”

Kat’s mom simply wouldn’t give up hope. She asked nurses and hospital staff what kind of antivirals were available. She found the following list:

• Oseltamivir is an antiviral that treats influenza. It is a neuraminidase inhibitor. • Acyclovir is an antiviral used to treat herpes simplex virus (HSV). This drug stops replication of viral DNA. • Raltegravir is an antiviral used to treat HIV. This drug stops integration of HIV into the host genome. • Lamivudine is an antiviral used to treat HIV. This drug stops the action of the enzyme reverse transcriptase.

Reverse transcriptase is the enzyme that copies HIV RNA into DNA. • Maraviroc is an antiviral used to treat HIV. It blocks entry of the virus into macrophages and T-Cells.

It didn’t appear that any one of these would work for Kat. Kat’s mom began crying. She sat in the waiting room chair in disbelief. How had she missed the signs and let this happen?

Questions 1. What is an antibiotic? Why won’t an antibiotic be effective in treating COVID-19?

2. What is an antiviral? When are antiviral treatments most effective? How do antivirals avoid harming the host?

3. For each of the antivirals Kat’s mom identified, suggest a reason why they will not work for SARS-CoV-2.

4. Using what you have learned about COVID-19, suggest a possible target or target step in the SARS-CoV-2 life cycle for an antiviral drug target. Consider how your proposed antiviral target or target step may impact the health or well-being of the human host.

 

 

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Page 6“Pandemic Pandemonium” by Kosinski-Collins, Mehrmanesh, Cuomo, & Piasta

Part V – What Do We Do Next? At home, Megan struggled with the news that Kat was going to stay in the hospital for some time. She decided she wanted to write an email to their soccer team telling them of Kat’s diagnosis. She thought it was her job to tell them that they were at risk, and they shouldn’t take COVID-19 as lightly as she and her sister had.

In time, Kat recovered, but Megan and her dad never developed outward symptoms of COVID-19. The girls’ mom developed a mild case of the disease with a slight cough and fever, but never anything like what Kat had. Later tests showed everyone in the family had been exposed to the disease, but only Kat developed a severe symptomatic case. Megan and her parents had been lucky.

Assignment Adopting the role of Megan, draft an email to Kat’s teammates. Consider the following when drafting your email:

• What and how much should you tell the team about the situation with your sister? • Is it ethical to share the specifics of her situation? • How much advice (if any) would you provide to the team about quarantine and what to do next? • Do you think quarantines are effective? Why or why not? • How would you make the team believe that your advice is real and not anecdotal? • Would you share any of the science you had learned? • What will be your next steps going forward?

2

References Bonchristiani, H.F. et al. 2009. Respiratory viruses. In Encyclopedia of Microbiology 3rd ed. 500–18. Fehr, A.R., and S. Perlman S. 2015. Coronaviruses: an overview of their replication and pathogenesis. Methods in

Molecular Biology 1282:1–23. doi:10.1007/978-1-4939-2438-7_1. Holmes, K. 2003. Sars-associated coronavirus. New England Journal of Medicine 348:1948–51. doi: 10.1056/

NEJMp030078. Hu, W. and S. Hughes. 2012. HIV-1 Reverse transcription. Cold Spring Harb. Perspect. Med. 2:a006882. doi:

10.1101/cshperspect.a006882. Novakova, L. et al. 2018. Current antiviral drugs and their analysis in biological materials- Part 1: Antivirals against

respiratory and herpes viruses. Journal of Pharmaceutical and Biomedical Analysis 147: 400–16. doi: 10.1016/j. jpba.2017.06.071.

Payne, S. 2017. Introduction to DNA viruses. In: Viruses From Understanding to Investigation, 231–6. doi: 10.1016/ B978-0-12-803109-4.00028-3.

Sola, I. et. al. 2015. Continuous and Discontinuous RNA synthesis in coronavirus. Annual Review of Virology 2(1): 265–88. doi:10.1146/annurev-virology-100114-055218.

Xu, H. et al. 2020. High expression of ACE2 receptor of 2019-nCoV on the epithelial cells of oral mucosa. International Journal of Oral Science 12:8. doi: 10.1038/s41368-020-0074-x.

Pandemic Pandemonium

 
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LAB ACTIVITY: Chap 19 – Conventional Energy

LAB ACTIVITY: Chap 19 – Conventional Energy. NAME: _______________________ Section: ____ Date: _______________

 

LAB ACTIVITY: Chap 19 – Conventional Energy

 

Choosing a Car: Conventional or Hybrid? One person buys a compact sedan that costs $15,000 and gets 20 miles per gallon. Another person pays $22,000 for the hybrid version of the same compact sedan, which gets 50 miles per gallon. Each owner drives 12,000 miles per year and plans on keeping the vehicle for 10 years.

(a) A gallon of gas emits 20 pounds of CO2 when burned in an internal combustion engine.

The average cost of a gallon of gas over the 10-year ownership period is $3.00.

(i) Calculate how many gallons of gas each vehicle uses per year.

(ii) Calculate the cost of the gas that each vehicle uses per year.

(iii) Calculate the amount of CO2 that each vehicle emits per year.

(b) Based on your answers to questions i–iii, complete the data table below.

 

Year of operation Sedan: total costs-purchase and gas ($) Sedan: cumulative CO2 emissions (pounds) Hybrid: total costs-purchase and gas ($) Hybrid: cumulative CO2 emissions (pounds)
1        
2        
3        
4        
5        
6        
7        
8        
9        
10        

 

(c) Use the data in the table to answer the following questions:

(i) Estimate how many years it would take for the hybrid owner to recoup the extra cost

of purchasing the vehicle based on savings in gas consumption.

(ii) After the amount of time determined in (i), compare and comment on the total costs

(purchase and gas) for each vehicle at that time.

(iii) Over the 10-year ownership period, which vehicle is the more economically and

environmentally costly to operate (in terms of dollars and CO2 emissions), and by

how much?

(d) Suggest ways that the owner of the conventional car could reduce the overall yearly CO2

emissions from the vehicle.

(e) Suggest ways that the hybrid owner could become carbon-neutral in terms of operating the

vehicle.

LAB ACTIVITY: Chap 19 – Conventional Energy

 
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UMUC Biology Lab 3: Cell Structure And Function

UMUC Biology Lab 3: Cell Structure And Function.

Your Full Name:

UMUC Biology 102/103
Lab 3: Cell Structure and Function
INSTRUCTIONS:

• On your own and without assistance, complete this Lab 3 Answer Sheet electronically and submit it via the Assignments Folder by the date listed in the Course Schedule (under Syllabus).
• To conduct your laboratory exercises, use the Laboratory Manual located under Course Content. Read the introduction and the directions for each exercise/experiment carefully before completing the exercises/experiments and answering the questions.
• Save your Lab 3 Answer Sheet in the following format:  LastName_Lab3 (e.g., Smith_Lab3).
• You should submit your document as a Word (.doc or .docx) or Rich Text Format (.rtf) file for best compatibility.

Pre-Lab Questions

1. Identify three major similarities and differences between prokaryotic and eukaryotic cells.

 

2. Where is the DNA housed in a prokaryotic cell? Where is it housed in a eukaryotic cell?

 

3.  Identify three structures which provide support and protection in a eukaryotic cell.

Experiment 1: Cell Structure and Function
The structure of a cell dictates the majority of its function. You will view a selection of slides that exhibit unique structures that contribute to tissues function.

Materials:
Onion (allium) Root Digital Slide Images

Procedure
1. Examine the onion root tip digital slide images on the following pages. Then, respond to the Post-Lab Questions.

Onion Root Tip: 100X

Onion Root Tip: 1000X

Onion Root Tip: 1000X

 

Onion Root Tip: 100X. Each dark circle indicates a different nucleus.

Onion Root Tip: 1000X

Post-Lab Questions
1. Label each of the arrows in the following slide image: A=Chromosomes, B=Nucleus, C=Cytoplasm, D=Cell Wall
2. What is the difference between the rough and smooth endoplasmic reticulum?

 

3. Would an animal cell be able to survive without a mitochondria? Why or why not?

 

 

4. What could you determine about a specimen if you observed a slide image showing the specimen with a cell wall, but no nucleus or mitochondria?

 

5. Hypothesize why parts of a plant, such as the leaves, are green, but other parts, such as the roots, are not. Use scientific reasoning to support your hypothesis.

Experiment 2: Osmosis – Direction and Concentration Gradients
In this experiment, we will investigate the effect of solute concentration on osmosis. A semi-permeable membrane (dialysis tubing) and sucrose will create an osmotic environment similar to that of a cell. This selective permeability allows us to examine the net movement of water across the membrane. You will begin the experiment with a 30% sucrose solution, and perform a set of serial dilutions to create lower concentration solutions. Some of the sucrose concentrations will be membrane permeable; while others will not be permeable (can you determine why this is?).

Materials
(3) 250 mL Beakers
(1) 10 mL Graduated Cylinder
(1) 100 mL Graduated Cylinder
Permanent Marker
*8 Rubber Bands (2 blue, 2 green, 2 red, and 2 yellow)
60 g Sucrose (Sugar) Powder, C12H22O11
4 Waste Beakers (any volume)
*Paper Towels
*Scissors
*Stopwatch
*Water
*(4) 15 cm. Pieces of Dialysis Tubing
*Contains latex. Please handle wearing safety gloves if you have a latex allergy.

*You Must Provide

*Be sure to measure and cut only the length you need for this experiment. Reserve the remainder for later experiments.

Procedure
1. Use the permanent marker to label the three 250 mL beakers as 1, 2, and 3.
2. Cut four strips of dialysis tubing, each 15.0 cm long. Fill Beaker 3 with 100 mL of water and submerge the four pieces of dialysis tubing in the water for at least 10 minutes.
3. After 10 minutes, remove one piece of tubing from the beaker. Use your thumb and pointer finger to rub the tubing between your fingers; this will open the tubing. Close one end of the tubing by folding over 3.0 cm of one end (this will become the bottom). Fold it again and secure with a yellow rubber band (use
4. Tie a knot in the remaining dialysis tubing just above or just below the rubber band. This will create a seal and ensures that solution will not leak out of the tube later in the experiment.
5. To test that no solution can leak out, add a few drops of water to the tubing and look for water leakage. If any water leaks, tighten the rubber band and/or the knot in the tubing. Make sure you pour the water out of the tubing before continuing to the next step.
6. Repeat Steps 4 – 5 with the three remaining dialysis tubes, using each of the three remaining rubber band colors.
7. Reconstitute the sucrose powder according to the instructions provided on the bottle’s label (your kit contains 60 g of sucrose in a chemical bottle) . This will create 200 mL of a 30% stock sucrose solution.
8. Use Table 2 to create additional sucrose solutions that are 30%, 15% and 3% concentrated, respectively. Use the graduated cylinder and waste beakers to create these solutions. Set these solutions aside.
Table 2: Serial Dilution Instructions
Sucrose Solution mL of Stock Sucrose Solution Needed mL of Water Needed
30% 10  0
15% 5  5
3% 1  9
3% 1  9
9. Pour 150 mL of the remaining stock sucrose solution into Beaker 1.
10. Use some of the remaining stock sucrose solution to create an additional 200 mL of a 3% sucrose solution into Beaker 2.
Hint: Use your knowledge of serial dilutions to create this final, 3% sucrose solution.
11. Measure and pour 10 mL of the remaining 30% sucrose solution into the dialysis bag with the yellow rubber band. Seal the top of this tubing with the remaining yellow rubber band.
12. Measure and pour 10 mL of the 15% sucrose solution in the bag with the red rubber band, and seal the top of the dialysis tubing with the remaining red rubber band. 10 mL of the 3% sucrose solution in the bag with the blue rubber band, and seal the dialysis tubing with the remaining blue rubber band. The final 10 mL of 3% sucrose solution in the bag with the green rubber band. Seal the dialysis tubing with the remaining green rubber band.
13. Verify and record the initial volume of solution from each bag in Table 3.

Figure 8: The dialysis bags are filled with varying concentrations of sucrose solution and placed in one of two beakers.
14. Place the yellow, red, and blue banded tubing in Beaker 2. Place the green banded tubing in Beaker 1 (Figure 8).
15. Hypothesize whether water will flow in or out of each dialysis bag. Include your hypotheses, along with supporting scientific reasoning in the Hypotheses section at the end of this procedure.
16. Allow the bags to sit for one hour. While waiting, pour out the water in the 250 mL beaker that was used to soak the dialysis tubing in Step 1. You will use the beaker in Step 19.
17. After allowing the tubing to sit for one hour, remove them from the beakers.
18. Carefully open the tubing. The top of the tubing may need to be cut off/removed as they tend to dry out over the course of an hour. Measure the solution volumes of each dialysis bag using the 100 mL graduated cylinder. Make sure to empty and dry the cylinder completely between each sample.
19. Record your data in Table 3.
Table 3: Sucrose Concentration vs. Tubing Permeability
Band Color Sucrose % Initial Volume (mL) Final Volume (mL) Net Displacement (mL)
Yellow
Red
Blue
Green
Hypothesis:

Post-Lab Questions
1. For each of the tubing pieces, identify whether the solution inside was hypotonic, hypertonic, or isotonic in comparison to the beaker solution in which it was placed.

2. Which tubing increased the most in volume? Explain why this happened.

 

3. What do the results of this experiment this tell you about the relative tonicity between the contents of the tubing and the solution in the beaker?
4. What would happen if the tubing with the yellow band was placed in a beaker of distilled water?

5. How are excess salts that accumulate in cells transferred to the blood stream so they can be removed from the body? Be sure to explain how this process works in terms of tonicity.

6. If you wanted water to flow out of a tubing piece filled with a 50% solution, what would the minimum concentration of the beaker solution need to be? Explain your answer using scientific evidence.

7. How is this experiment similar to the way a cell membrane works in the body? How is it different? Be specific with your response.

Your Full Name:

UMUC Biology 102/103

Lab 3: Cell Structure and Function

INSTRUCTIONS:

 

· On your own and without assistance, complete this Lab 3 Answer Sheet electronically and submit it via the Assignments Folder by the date listed in the Course Schedule (under Syllabus).

· To conduct your laboratory exercises, use the Laboratory Manual located under Course Content. Read the introduction and the directions for each exercise/experiment carefully before completing the exercises/experiments and answering the questions.

· Save your Lab 3 Answer Sheet in the following format: LastName_Lab3 (e.g., Smith_Lab3).

· You should submit your document as a Word (.doc or .docx) or Rich Text Format (.rtf) file for best compatibility.

Pre-Lab Questions

 

 

1. Identify three major similarities and differences between prokaryotic and eukaryotic cells.

 

 

 

2. Where is the DNA housed in a prokaryotic cell? Where is it housed in a eukaryotic cell?

 

 

 

3. Identify three structures which provide support and protection in a eukaryotic cell.

 

Experiment 1: Cell Structure and Function

The structure of a cell dictates the majority of its function. You will view a selection of slides that exhibit unique structures that contribute to tissues function.

concept_tab_l

Materials:

Onion (allium) Root Digital Slide Images

 

 

Procedure

1. Examine the onion root tip digital slide images on the following pages. Then, respond to the Post-Lab Questions.

Onion Root Tip: 100X
Onion Root Tip: 100X

 

 

Onion Root Tip: 1000X
Onion Root Tip: 1000X

 

 

Onion Root Tip: 1000X
Onion Root Tip: 1000X

 

 

 

 

Onion Root Tip: 100X. Each dark circle indicates a different nucleus.
Onion Root Tip: 100X. Each dark circle indicates a different nucleus.

 

 

Onion Root Tip: 1000X
Onion Root Tip: 1000X

 

 

Post-Lab Questions

1. Label each of the arrows in the following slide image: A=Chromosomes, B=Nucleus, C=Cytoplasm, D=Cell Wall

Lab3_Experiment1_PostLabQuestion1

 

2. What is the difference between the rough and smooth endoplasmic reticulum?

 

 

 

 

3. Would an animal cell be able to survive without a mitochondria? Why or why not?

 

 

 

 

 

4. What could you determine about a specimen if you observed a slide image showing the specimen with a cell wall, but no nucleus or mitochondria?

 

 

 

 

5. Hypothesize why parts of a plant, such as the leaves, are green, but other parts, such as the roots, are not. Use scientific reasoning to support your hypothesis.

 

 

Experiment 2: Osmosis – Direction and Concentration Gradients

In this experiment, we will investigate the effect of solute concentration on osmosis. A semi-permeable membrane (dialysis tubing) and sucrose will create an osmotic environment similar to that of a cell. This selective permeability allows us to examine the net movement of water across the membrane. You will begin the experiment with a 30% sucrose solution, and perform a set of serial dilutions to create lower concentration solutions. Some of the sucrose concentrations will be membrane permeable; while others will not be permeable (can you determine why this is?).

concept_tab_2

Materials

(3) 250 mL Beakers (1) 10 mL Graduated Cylinder (1) 100 mL Graduated Cylinder Permanent Marker *8 Rubber Bands (2 blue, 2 green, 2 red, and 2 yellow) 60 g Sucrose (Sugar) Powder, C12H22O11 4 Waste Beakers (any volume) *Paper Towels *Scissors

 

*Stopwatch *Water *(4) 15 cm. Pieces of Dialysis Tubing *Contains latex. Please handle wearing safety gloves if you have a latex allergy. *You Must Provide *Be sure to measure and cut only the length you need for this experiment. Reserve the remainder for later experiments.

 

Procedure

1. Use the permanent marker to label the three 250 mL beakers as 1, 2, and 3.

2. Cut four strips of dialysis tubing, each 15.0 cm long. Fill Beaker 3 with 100 mL of water and submerge the four pieces of dialysis tubing in the water for at least 10 minutes.

3. After 10 minutes, remove one piece of tubing from the beaker. Use your thumb and pointer finger to rub the tubing between your fingers; this will open the tubing. Close one end of the tubing by folding over 3.0 cm of one end (this will become the bottom). Fold it again and secure with a yellow rubber band (use

4. Tie a knot in the remaining dialysis tubing just above or just below the rubber band. This will create a seal and ensures that solution will not leak out of the tube later in the experiment.

5. To test that no solution can leak out, add a few drops of water to the tubing and look for water leakage. If any water leaks, tighten the rubber band and/or the knot in the tubing. Make sure you pour the water out of the tubing before continuing to the next step.

6. Repeat Steps 4 – 5 with the three remaining dialysis tubes, using each of the three remaining rubber band colors.

7. Reconstitute the sucrose powder according to the instructions provided on the bottle’s label (your kit contains 60 g of sucrose in a chemical bottle) . This will create 200 mL of a 30% stock sucrose solution.

8. Use Table 2 to create additional sucrose solutions that are 30%, 15% and 3% concentrated, respectively. Use the graduated cylinder and waste beakers to create these solutions. Set these solutions aside.

Table 2: Serial Dilution Instructions
Sucrose Solution mL of Stock Sucrose Solution Needed mL of Water Needed
30% 10 0
15% 5 5
3% 1 9
3% 1 9

9. Pour 150 mL of the remaining stock sucrose solution into Beaker 1.

10. Use some of the remaining stock sucrose solution to create an additional 200 mL of a 3% sucrose solution into Beaker 2.

Hint: Use your knowledge of serial dilutions to create this final, 3% sucrose solution.

11. Measure and pour 10 mL of the remaining 30% sucrose solution into the dialysis bag with the yellow rubber band. Seal the top of this tubing with the remaining yellow rubber band.

12. Measure and pour 10 mL of the 15% sucrose solution in the bag with the red rubber band, and seal the top of the dialysis tubing with the remaining red rubber band. 10 mL of the 3% sucrose solution in the bag with the blue rubber band, and seal the dialysis tubing with the remaining blue rubber band. The final 10 mL of 3% sucrose solution in the bag with the green rubber band. Seal the dialysis tubing with the remaining green rubber band.

13. Verify and record the initial volume of solution from each bag in Table 3.

Figure 8: The dialysis bags are filled with varying concentrations of sucrose solution and placed in one of two beakers.
Figure 8: The dialysis bags are filled with varying concentrations of sucrose solution and placed in one of two beakers.

14. Place the yellow, red, and blue banded tubing in Beaker 2. Place the green banded tubing in Beaker 1 (Figure 8).

15. Hypothesize whether water will flow in or out of each dialysis bag. Include your hypotheses, along with supporting scientific reasoning in the Hypotheses section at the end of this procedure.

16. Allow the bags to sit for one hour. While waiting, pour out the water in the 250 mL beaker that was used to soak the dialysis tubing in Step 1. You will use the beaker in Step 19.

17. After allowing the tubing to sit for one hour, remove them from the beakers.

18. Carefully open the tubing. The top of the tubing may need to be cut off/removed as they tend to dry out over the course of an hour. Measure the solution volumes of each dialysis bag using the 100 mL graduated cylinder. Make sure to empty and dry the cylinder completely between each sample.

19. Record your data in Table 3.

Table 3: Sucrose Concentration vs. Tubing Permeability
Band Color Sucrose % Initial Volume (mL) Final Volume (mL) Net Displacement (mL)
Yellow        
Red        
Blue        
Green        

Hypothesis:

 

Post-Lab Questions

1. For each of the tubing pieces, identify whether the solution inside was hypotonic, hypertonic, or isotonic in comparison to the beaker solution in which it was placed.

 

 

2. Which tubing increased the most in volume? Explain why this happened.

 

 

 

3. What do the results of this experiment this tell you about the relative tonicity between the contents of the tubing and the solution in the beaker?

4. What would happen if the tubing with the yellow band was placed in a beaker of distilled water?

 

5. How are excess salts that accumulate in cells transferred to the blood stream so they can be removed from the body? Be sure to explain how this process works in terms of tonicity.

 

6. If you wanted water to flow out of a tubing piece filled with a 50% solution, what would the minimum concentration of the beaker solution need to be? Explain your answer using scientific evidence.

 

7. How is this experiment similar to the way a cell membrane works in the body? How is it different? Be specific with your response.

UMUC Biology Lab 3: Cell Structure And Function

 
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