Week3-Assignment MicroBio

Week3-Assignment MicroBio.

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Kaplan University School of Health Sciences

HS320 Microbiology

COURSE #

Unit 3 Assignment:

Final Project, Part I

Unit outcomes addressed in this activity:

ď‚· Describe the characteristics of a prokaryotic genome

ď‚· Describe the roles of various microorganisms in our world

ď‚· Select appropriate methods to study microorganisms

ď‚· Analyze the role of microbes in human disease and public health

Course outcome practiced with this Assignment:

HS320-4: Discuss principles of microbial genetics in health science.

 

Instructions

ď‚· Prepare an outline of the final Project that you will submit for Unit 9.

ď‚· The outline must contain the following: 1. Title of the paper 2. Reason why you chose this pathogen 3. Three (3) main ideas/points that will be discussed

Requirements

ď‚· The paper you submit must be your own work.

ď‚· The viewpoint and purpose of this Assignment should be clearly established and sustained.

ď‚· Assignment should follow the conventions of Standard American English (correct grammar, punctuation, etc.).

ď‚· Your writing should be well ordered, logical and unified, as well as original and insightful.

ď‚· Your work should display superior content, organization, style, and mechanics.

ď‚· Use the APA style 6 for all citations.

ď‚· More details can be found in the GEL 1.1 Universal Writing Rubric. Submitting Your Assignment Put your Assignment in a Word document. Save it in a location and with the proper naming convention: username-HS320-section-unit3-Assignment.doc (username is your Kaplan username, section is your course section). When you are ready to submit it, go to the

 

 

 

 

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Kaplan University School of Health Sciences

HS320 Microbiology

COURSE #

Dropbox and complete the steps below:

ď‚· Click the link that says “Submit an Assignment”.

ď‚· In the “Submit to Basket” menu, select Unit 3: Assignment.

ď‚· In the “Comments” field, make sure to add at least the title of your paper.

ď‚· Click the “Add Attachments” button.

ď‚· Follow the steps listed to attach your Word document.

ď‚· To view your graded work, come back to the Dropbox or go to the Gradebook after your instructor has evaluated it.

Make sure that you save a copy of your submitted Assignment. Unit 3 Assignment, Final Project: Part I Grading Rubric = 44 points

Assignment Requirements Points possible

Points earned by student

The viewpoint and purpose of the Assignment are clearly stated

0–16

Clearly identifies the reason for choosing pathogen 0–12

Provides at least three main ideas for the paper 0–16

Total (Sum of all points)

Points deducted for spelling, grammar, and/or APA errors.

 

Adjusted total points

Instructor Feedback:

Week3-Assignment MicroBio

 
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Name of enzyme you will use: Catalase

Name of enzyme you will use: Catalase. Created an outline.

 

Include the following in your outline:

 

Name of enzyme you will use

Name of organism (if applicable)

The substrate and products in the chemical reaction

Method for measuring enzyme activity

Treatment: acidic fluid(s), pH, length of exposure, how you will treat your samples

The control(s) in the experiment

Hypothesis

How you will present your data (table and/or type of graph)

Anything else you would like to get feedback on before you start your experiment

 

****Here is the outline*****

 

Outline to Final Applied Lab Project:

Enzymes Reaction to Hydrogen Peroxide and Temperatures

 

Name of enzyme you will use:  Catalase

 

Substrate and products in the chemical reaction:  Hydrogen Peroxide

 

Method for measuring enzyme activity:  Balloons

 

Controls:  Independent: Temperature

Dependent:  Balloon

 

Length of exposure:  10 minutes

 

Hypothesis:  The response of enzyme to Hydrogen Peroxide and a specific        temperature

 

How you will present your data: Bar Graph

 

Summary of findings

 

*************************************

 

 

 

Instructions:

 

Demonstration of your knowledge of basic laboratory skills, experimental design, and/or data evaluation will be assessed by the submission of an applied final lab project.

 

Based on the outline, and the Lab submitted, the 4 outcomes need to be addressed

Laboratory Assignments

Addresses course outcomes 1-4:

·       recognize and explain how the scientific method is used to solve problems

·       make observations and discriminate between scientific and pseudoscientific explanations

·       weigh evidence and make decisions based on strengths and limitations of scientific knowledge and the scientific method

·       use knowledge of biological principles, the scientific method, and appropriate technologies to ask relevant questions, develop hypotheses, design and conduct experiments, interpret results, and draw conclusions

 

 

 

Experiment 2: Effect of Temperature on Enzyme Activity

Pre-Lab Questions

1. What reaction is being used to study the effect of temperature on enzyme activity in this experiment? Temperature can affect the enzyme catalytic reaction.

 

2. What does an increase in balloon diameter mean with respect to enzyme activity? The activity increases as well

 

 

3. Why is important to know this information before starting Experiment #1? The diameter of the balloon will show the activity of the enzyme based upon temperature.

 

Table 2: Balloon Circumference vs. Temperature
Tube Temperature (°C) Uninflated Balloon Circumference (cm) Final Balloon Circumference (cm) Difference in Balloon Circumference (cm)
1 – (Cold) 1  4 inches  6.5 2.5
2 – (RT)  2.3    6.75 2.75
3 – (Hot)  4    7.25 3.25

 

Insert labeled photos of your initial and final balloons here. Photos must be labeled! Include a note with your name and date on an index card in the pictures.

 

Post-Lab Questions

 

1. What is the enzyme in this experiment? The catalase. What is the substrate? The Hydrogen Peroxide

 

2. What is the independent variable in this experiment? Temperature. What is the dependent variable? Balloon diameter

 

3. How did temperature affect enzyme function? Hot temperature causes high enzyme activity, the cold has less activity, but the room temperature’s activity was slower to react.

 

 

4. Is there a negative control in this experiment? No negative controls. To revise we would use water, therefore nothing would be expected to happen.

 

 

 

© eScience Labs, LLC 2014

Name of enzyme you will use: Catalase

 
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“Keystone Species, Shrinking Red Knots, and Biomes”

“Keystone Species, Shrinking Red Knots, and Biomes”.

“Keystone Species, Shrinking Red Knots, and Biomes”

Our focus this week is on ecology.  Ecology is the study of interactions among organisms and between organisms and their physical environments. For your primary post, respond toone of the following three topics. Also, reply to at least one fellow student on any topic.

Topic 1

:  Keystone Species. Watch the video entitled “Some animals are more equal than others…” (1)* Then completely describe the concept of a keystone species, giving specific examples from the video.

Topic 2 [articles]: Shrinking Red Knots. Read two of the following three articles about shrinking Red Knots (2)*, (3)*, (4)*, or research additional information on your own. Then, address the following issues:

  • (a) Explain how the lifecycle of the Red Knot depends on hatchlings emerging at the same time as the insects hatch.
  • (b) What are the long-term ramifications of having a mismatch between the bird hatch and the insect hatch?
  • (c) Of the two articles you read, which of them do you feel was most informative?  Why?

Topic 3 [research]: Biomes. The term “biome” is described in the textbook. For this topic, describe the biome where you grew up (or where you currently live). Identify your location, the biome of the region, and describe the major characteristics of that biome. Add enough detail and commentary from your own experience. If you’re really ambitious, you could consider looking up the EPA “ecoregion,” which will give additional details about your region.

*References (in Strayer Writing Standards format).

  1. HHMI Biointeractive, May 3, 2016, Some animals are more equal than others: keystone species and trophic cascades., https://www.youtube.com/watch?time_continue=1142&v=hRGg5it5FMI
  2. Briggs, H. (2016, May 12). Shrinking bird pays the bill for Arctic warming. Retrieved from: http://www.bbc.com/news/science-environment-36266692
  3. Dussault, J. (2016, May 12). Climate change chould be shrinking these arctic birds. The Christian Science Monitor. Retrieved from: http://www.csmonitor.com/Science/2016/0512/Climate-change-could-be-shrinking-these-Arctic-birds
  4. Zimmer, C. (2016, May 12). Climate change and the case of the shrinking red knots,. The New York Times. Retrieved from: http://www.nytimes.com/2016/05/17/science/climate-change-bird-red-knots.html?_r=0

“Keystone Species, Shrinking Red Knots, and Biomes”

 
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Identification Of Unknown Microbe

Identification Of Unknown Microbe.

I

Cover page (Use this specific format)

 

RESEARCH REPORT

IDENTIFICATION OF UNKNOWN MICROBES

 

Course: Savannah State University – 3321L / 2020 Spring

 

Section: 1 (1 PM) or Section 2 (4 PM) (highlight one)

 

Group Name (type your group name): Group X

 

Submission option: Individual or Group (*up to 4 members per repot) (highlight one)

 

Authors (Student name and 915) who contribute to write this report

1. Student A / 915-XXXXX

2. Student B / 915-XXXXX

3.

4.

Introduction:

It is imperative to understand why one would want to differentiate between multiple types

of bacteria. In order for a person to receive proper treatment for a certain pathogen, the microbe

has to be first identified. This whole process is done for the reason that different treatments may

work effectively against one microbe, while it may prove to be ineffective against another. Also,

microbe identification is significant in processing of certain foods and development of antibiotics.

The overall purpose and aim of this investigation is to identify an unknown sample of bacteria

retrieved from the oral cavity of a group member. The following study was performed by following

a series of protocols and techniques listed in the lab manual given from Professor Takayuki Nitta

(Reference).

 

Materials & Methods

First, a sample was obtained from the oral cavity of a group member by using a sterile

cotton swab, and inoculated onto a T-soy agar plate. In order to maintain the freshness of the

unknown sample, the group changed the T-soy media of the bacteria by inoculating the bacteria

onto a new T-soy agar plate every 1 – 2 weeks.

The first test conducted was the Gram-staining test, —————————————.

 

Or

 

To identify the microbe isolated from XXXX, a series of tests are completed. The summary for

the reagents, procedures used in the tests are shown in Table 1.

 

Table 1 Summary of methods to characterize the bacteria isolated from forehead.

 

 

II

Test name Purpose Reagents/

Materials

Procedures

Gram stain 1. To determine shape of bacteria cells

2. To determine Gram reaction of bacteria

Cristal violet

Iodine

Alcohol

Safranin

After fixation of the samples

smeared on the microslide, the

bacteria were exposed to cristal

violet, iodine, alcohol and

safranin, sequentially. The

bacteria on the slide were

observed by compound

microscope.

Colony shape To characterize shape of

bacterial colony

Dissecting

microscope

Observe bacterial colony by

microscope

e.t.c

 

 

Students need to list all methods used to identify the bacteria

 

Results

The unknown microbe appeared to form opaque yellow colored colonies when plated. Ultimately,

the unknown microbe was a gram-positive microbe with a staphylococcus type of morphology. It

was able to breakdown hydrogen peroxide, survive in a region of high salt concentration, coagulate

blood plasma, and also able to ferment mannitol. Table 2 below lists the tests performed along

with reagents, and also the observer’s observations and results, while Figure 1 shows the process

in which tests were completed to make the final deduction.

 

Table 2. Summary of results obtained through the tests Test Observations Results/Interpretation

Gram stain Violet colored clusters of spheres Coccus-shaped and Gram-positive

Endospore stain No green was stained on slide and

grape-like clusters were seen

Cannot form endospores and the

morphology is staphylococcus

Catalase Bubbles appeared instantly Has ability to catalyze breakdown

of hydrogen peroxide

Indole test Pale yellow color Negative indole test

MSA Growth / Media became yellow Halophiles and ferment mannitol

e.t.c.

Students need to list all results obtained through the experiments

 

• Insert figures of your complete diagnostic key in section “Results” Alternatively cite the figures of diagnostic key in section “Results” and cite the figures

in the main text.

 

(e.g. To identify the isolated microbe, we analyzed the diagnostic key. The complete diagnostic

key was inserted in this section (Fig. 1) or attached separately (Fig. 1).

 

 

III

 

 

Fig. 1. Diagnostic key for Gram Positive and Negative bacteria

(Here is one page only, but 4 pages of the completed key are required for full credits)

 

 

Discussion & Conclusion

In conclusion, it is deduced that the unkown bacteria retrieved is XXXXXXX. This

conclusion was reached due to the parallel in test results of the group’s data and that of Gloria et

al, who asserts that S. aureus is a gram positive bacterium which displays the characteristic of

clumping (Gloria et al, 2011). She then goes on to state that S. aureus is a “gram-positive

bacterium…that is also able to ferment glucose…produces catalase, nitrate, and coagulase” (Gloria

et al, 2011). According to Table 1 and Fig. 1, the tests conducted all resulted in the same findings.

Also, the unknown sample proved to be indole negative and had an inability to create spores.

 

(e.g. When you have additional tests to identify microbes or that were not completed)

Unfortunately, the group was not able to complete oxidation and fermentation tests because

XXXXXXXXX. In order to combat this problem in the future, the different microbiology lab

classes should be separated more carefully, and also, the group should be sure to label its materials

better.

 

 

IV

 

References

1. “Microbiology (BIOL3321L) Laboratory Manual Fall 2014”. Nitta, Takayuki. (Fall 2014). 1st edition. Pgs. 1-XX. Print.

2. “Gram Stain of Staphylococcus aureus from a wound infection” Gloria D., Lewis Tomalty. American Society for Microbiology. August 22, 2011.

Identification Of Unknown Microbe

 
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